rstoolbox.utils.make_redundancy_table

rstoolbox.utils.make_redundancy_table(precalculated=False, select=None)

Query into the PDB to retrieve the pre-calculated homology tables.

Warning

This function requires an active Internet connection.

Parameters:
  • precalculated (bool) – When True, provide the homology table provided by the library; otherwise, query on PDB.
  • select (list() of int) – List of homology thresholds to include. By default is None. This option is ignored if precalculated is True.
Returns:

DataFrame

Raises:
ValueError:When trying to select an homology threshold not provided by the PDB database.